QTL Accession ID | AQD021 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | LFDRY |
Trait Name | leaf drying |
Published Symbol | |
Trait Synonym(s) |
LD leaf drying |
Trait Category | Abiotic stress |
Chromosome | 2 |
Comments | Related with water stress tolerance. Based on data of experiment at IRRI in 1998. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 30,270,605-30,273,365 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Aberdeen Bala/Azu QTL 2002 | BNL6.32 | 2 | 159-159 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQD021 | 2 | 159 | 159 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C601 | RFLP | Oryza sativa | qtl_marker |
To | G57 | RFLP | Oryza sativa | qtl_marker |
To | RG256 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000446) | Price-A-H et al., 2002 (IAGP) |
Plant Structure | (PO:0009025) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007130) | Gramene curators, 2007 (IC) |
(PO:0007134) | Gramene curators, 2007 (IC) | |
Growth Stage | (GRO:0007139) | Gramene curators, 2007 (IC) |
(GRO:0007140) | Gramene curators, 2007 (IC) | |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Price-A-H et al., 2002 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr2 | 30,270,605 | 30,273,365 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr2 | 30,270,605 | 30,273,365 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr2 | 30,270,605 | 30,273,365 | Huang X, et al, Nat Genetics 2010 Nov... | 9 | Search for SNPs |
chr2 | 30,270,605 | 30,273,365 | RiceDiversity 44K SNP assay, 34 trait... | 9 | Search for SNPs |
chr2 | 30,270,605 | 30,273,365 | RiceDiversity 44K SNP assay, 34 trait... | 0 |