![[Home Page]](/images/icons/gramene_logo180new.jpg "[Home Page]"){kind=icon}
Protein Home |
Advanced Search |
Search by Pfam or PROSITE |
Browse by GO Slim |
Documents |
Tutorial |
FAQ |
Help
Oryza sativa (japonica cultivar-group) protein "P12215" (Cytochrome c biogenesis protein ccsA) | Accession | P12215 |
|---|---|
| Species | Oryza sativa (japonica cultivar-group) [ GR_tax:013684 ] |
| Name | Cytochrome c biogenesis protein ccsA |
| Symbol | ccsA |
| Synonyms (0) | |
| E.C. Numbers (0) | None |
| Gene Names (1) | ccsA (cytochrome c biogenesis protein) |
| Organelle | Chloroplast |
| Best Hits To TIGR Rice Gene Models (0) | None [ Click here to generate a BLASTP query ] |
| IRGSP/RAP Genes (0) | None |
| Source | SWISSPROT |
| GenBank Accessions (1) | P12215 |
| UniProt Accession (Sequence) | P12215 |
| Cultivar | Nipponbare ( GRIN , IRIS ) |
| Comment | It encodes the cytochrome c biogenesis protein. (Imported from Gene GR:0100299) |
Associated Ontologies (4) | Term Type | Term | Reference | Evidence | ||
|---|---|---|---|---|---|
| Biological Process | respiratory chain complex IV assembly (GO:0008535) | Jaiswal-P et al., 2003 |
| ||
| protein complex assembly (GO:0006461) | Jaiswal-P et al., 2003 |
| |||
| Cellular Component | membrane (GO:0016020) | Jaiswal-P et al., 2003 |
| ||
| Jaiswal-P et al., 2004 | RCA | ||||
| plastid (GO:0009536) | Hiratsuka-J et al., 1989 | ISS | |||
| Boeckmann-B et al., 2003 | IC |
Keywords (2) Similarity to Other Proteins (22) | Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
| Others : Fungi | Metazoa |
| 3D protein structures : BLink from NCBI |
Protein Features (11) | Pfam (Info) | PF01578; CytC_asm | All Members of this Family | |
|---|---|---|---|
| Prosite (Info) | Not available | ||
| Physio-chemical features | P12215 | ||
| ProtoMap (Info) | CCSA_ORYSA | ||
| Feature Type | Residues (From - To) | Evidence | |
| Signal peptide | 1 - 26 | Jaiswal-P et al., 2002 | |
| Transmembrane | 9 - 31 | Jaiswal-P et al., 2004 | |
| Transmembrane | 46 - 63 | Jaiswal-P et al., 2004 | |
| Transmembrane | 70 - 89 | Jaiswal-P et al., 2004 | |
| Transmembrane | 143 - 165 | Jaiswal-P et al., 2004 | |
| Transmembrane | 223 - 245 | Jaiswal-P et al., 2004 | |
| Transmembrane | 260 - 274 | Jaiswal-P et al., 2004 | |
| Transmembrane | 287 - 309 | Jaiswal-P et al., 2004 | |
Database Cross-References (5) 
