ID | 17603 | ||||
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Name | CDO204 (GRAINGENES PROBE) | ||||
Synonyms (4) |
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Type | RFLP | ||||
Species | Avena sativa (Oat) [ GR_tax:012534 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CDO204 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.4 |
Vector Excision Enzyme | EcoRI/XhoI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0103 |
Overgo2 |
GATACCAACACAACAATCAGTAGTAGTCCAGTAAAACTGGCATAACAAGAACATTGCAGAATCTACAGATCTCGGGAAAC
TCGCTCTAAGACAAGATCCCACTTTCCAGTACTCCTACCAGGATCTTGCACACTAAAATATTGCAACGCCTACTAAAAAC
TGTACAGACATAACGCACACATTGATCCAGTAGCTTAAAATCGGCAGATCCCAGGCTTCTCAGTACGGCAGAGCGTGAGC
ATCTCTTCATACTTGGAAGGATAGACAAAGCCCCACAGCTCAACTTCTTTAACTGCAAATCCGGGGAATGCGATAAACAC
TGGTTGTCAAATGTCTCTGAATTTGAACTTGAACCACTCAAAAGGTCTGAGGTCTA
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 6A | 101-101 cM | View Comparative Map | |||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 6A | 4.5-4.5 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 6A | 4.5-4.5 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 6A | 101-101 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Minnesota John/Dor F2 QTL 2000 | BNL6.32 | 9a | 73-73 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Cornell 9024/LH422 RI QTL 1996 | BNL6.32 | 6 | 38.9-38.9 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 2 | 80.3-80.3 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 2 | 91.1-91.1 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | F | 60.8-60.8 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 6,242,963-6,243,337 bp | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Zizania palustris | QTL | AQK024 | qtl_marker |
Zizania palustris | QTL | AQK037 | qtl_marker |
Oryza sativa | QTL | CQAS74 | qtl_marker |
Oryza sativa | QTL | CQAS69 | qtl_marker |
Avena sativa | EST | AA231640 | related_sequence |
CDO204 SL Autorad: Survey blot of the probe CDO204 for the BS125/2/BS125/WLO2 population |