ID | 17113 | ||||||||
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Name | RZ672 (GRAINGENES PROBE) | ||||||||
Synonyms (8) |
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Deprecated Gramene Marker Acc | 48582844 | ||||||||
MAIZEGDB PROBE | p-rz672 | ||||||||
Type | RFLP | ||||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||||
Germplasm | |||||||||
Description | |||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ672 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.6 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0494 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 14,849,308-14,849,482 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 14,851,636-14,852,161 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | TTU CTIR 2000 | BNL6.32 | 3 | 72-72 cM | View Comparative Map | |||
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QTL | Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 3 | 96.9-96.9 cM | View Comparative Map | |||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 3 | 72-72 cM | View Comparative Map | ||||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 3 | 20.7-20.7 cM | View Comparative Map | ||||
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CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 3 | 72-72 cM | View Comparative Map | ||||
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JIC IR20/63-83 F2 QTL 1998 | BNL6.32 | 3 | 103.1-103.1 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 3 | 118.5-118.5 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 3 | 50.6-50.6 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 4B | 26-26 cM | View Comparative Map | |||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 4B | 21.4-21.4 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 4B | 21.4-21.4 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 4B | 26-26 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | C | 73.1-73.1 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | BNL 1996 | BNL6.32 | 1 | 86.2-86.2 cM | View Comparative Map | |||
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Cornell Wilson 1999 | BNL6.32 | 1 | 78.4-78.4 cM | View Comparative Map | ||||
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BNL6.32 | 9 | 77.4-77.4 cM | View Comparative Map | |||||
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UMC 1998 | BNL6.32 | 1 | 81.2-81.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 26.9-26.9 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 3 | 26.2-26.2 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQBS055 | qtl_marker |
Oryza sativa | QTL | AQED021 | qtl_marker |
Oryza sativa | QTL | AQED022 | qtl_marker |
Oryza sativa | QTL | AQED032 | qtl_marker |
Oryza sativa | QTL | AQED033 | qtl_marker |
Oryza sativa | QTL | AQED034 | qtl_marker |
Oryza sativa | QTL | AQFE010 | qtl_marker |
Oryza sativa | QTL | AQFE071 | qtl_marker |
Oryza sativa | QTL | AQFE072 | qtl_marker |
Oryza sativa | QTL | AQFE073 | qtl_marker |
Oryza sativa | QTL | AQFE086 | qtl_marker |
Oryza sativa | QTL | AQFE087 | qtl_marker |
Oryza sativa | QTL | AQFE105 | qtl_marker |
Oryza sativa | QTL | AQFT020 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 1.04 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 9.04 | bin_marker |
Oryza sativa | QTL | CQH15 | qtl_marker |
Oryza sativa | Probed Site | rz672a(cgs) | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231801 | related_sequence |
Oryza sativa Indica Group | EST | AA231801 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231933 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231933 | related_sequence |
RZ672 BROWS Autorad: Survey blot of the probe RZ672 for the comparative barley/rice/oat/wheat/sugarcane project | |
RZ672 SL Autorad: Survey blot of the probe RZ672 for the BS125/2/BS125/WLO2 population |