ID | 12566 |
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Name | RM236 |
Synonyms (1) | CT16 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM236 |
Repeat Motif | (CT)18 |
Anneal Temperature | 55 |
Expected PCR Product Size | 191 |
Sequence Source | AF344056 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 2,105,542-2,105,840 bp | View Comparative Map | |||
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BNL6.32 | Chr. 2 | 2,105,603-2,105,793 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | IRMI 2003 | BNL6.32 | 2 | 10.8-10.8 cM | View Comparative Map | |||
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QTL | Brazil BG90-2/RS16 QTL 2002 | BNL6.32 | 2 | 14.1-14.1 cM | View Comparative Map | |||
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CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 2 | 9.1-9.1 cM | View Comparative Map | ||||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 2 | 15.6-15.6 cM | View Comparative Map | ||||
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Cornell V20A/glab QTL 2004 | BNL6.32 | 2 | 175-175 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 2 | 13.3-13.3 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 2 | 13.9-13.9 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQE001 | qtl_marker |
Oryza sativa | QTL | AQE024 | qtl_marker |
Oryza sativa | QTL | AQE036 | qtl_marker |
Oryza sativa | QTL | AQE049 | qtl_marker |
Oryza sativa | QTL | AQFU009 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT12436 | equivalent_to |
Oryza sativa Indica Group | Primer | RM236_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM236_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344056 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344056 | source_sequence |
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