ID | 12226 |
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Name | RM228 |
Synonyms (1) | CT221 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM228 |
Repeat Motif | (CA)6(GA)36 |
Anneal Temperature | 55 |
Expected PCR Product Size | 154 |
Sequence Source | AF344048 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
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Gramene Diversity Rice Marker | 45 |
Gramene Diversity Rice Marker | 1240 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 10 | 22,243,157-22,243,349 bp | View Comparative Map | |||
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BNL6.32 | Chr. 10 | 22,243,164-22,243,277 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 2001 | BNL6.32 | 10 | 87.6-87.6 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAB003 | qtl_marker |
Oryza sativa | QTL | AQAB013 | qtl_marker |
Oryza sativa | QTL | AQAB027 | qtl_marker |
Oryza sativa | QTL | AQAB051 | qtl_marker |
Oryza sativa | QTL | AQAB068 | qtl_marker |
Oryza sativa | QTL | AQAE015 | qtl_marker |
Oryza sativa | QTL | AQAE024 | qtl_marker |
Oryza sativa | QTL | AQAG038 | qtl_marker |
Oryza sativa | QTL | AQAG051 | qtl_marker |
Oryza sativa | QTL | AQAI005 | qtl_marker |
Oryza sativa | QTL | AQAI014 | qtl_marker |
Oryza sativa | QTL | AQAI062 | qtl_marker |
Oryza sativa | QTL | AQAI076 | qtl_marker |
Oryza sativa | QTL | AQAK006 | qtl_marker |
Oryza sativa | QTL | AQAK031 | qtl_marker |
Oryza sativa | QTL | AQAM031 | qtl_marker |
Oryza sativa | QTL | AQAM032 | qtl_marker |
Oryza sativa | QTL | AQAM033 | qtl_marker |
Oryza sativa | QTL | AQAM034 | qtl_marker |
Oryza sativa | QTL | AQAM035 | qtl_marker |
Oryza sativa | QTL | AQBK020 | qtl_marker |
Oryza sativa | QTL | AQBK027 | qtl_marker |
Oryza sativa | QTL | AQBK043 | qtl_marker |
Oryza sativa | QTL | AQBK051 | qtl_marker |
Oryza sativa | QTL | AQBK053 | qtl_marker |
Oryza sativa | QTL | AQBK055 | qtl_marker |
Oryza sativa | QTL | AQCF013 | qtl_marker |
Oryza sativa | QTL | AQCF024 | qtl_marker |
Oryza sativa | QTL | AQCF045 | qtl_marker |
Oryza sativa | QTL | AQCG003 | qtl_marker |
Oryza sativa | QTL | AQCU049 | qtl_marker |
Oryza sativa | QTL | AQCU147 | qtl_marker |
Oryza sativa | QTL | AQCU175 | qtl_marker |
Oryza sativa | QTL | AQED025 | qtl_marker |
Oryza sativa | QTL | AQEE047 | qtl_marker |
Oryza sativa | QTL | AQEI019 | qtl_marker |
Oryza sativa | QTL | AQEI037 | qtl_marker |
Oryza sativa | QTL | AQEI074 | qtl_marker |
Oryza sativa | QTL | AQEX006 | qtl_marker |
Oryza sativa | QTL | AQEX020 | qtl_marker |
Oryza sativa | QTL | AQEX027 | qtl_marker |
Oryza sativa | QTL | AQEX033 | qtl_marker |
Oryza sativa | QTL | AQEY022 | qtl_marker |
Oryza sativa | QTL | AQFU012 | qtl_marker |
Oryza sativa | QTL | AQFU035 | qtl_marker |
Oryza sativa | QTL | AQGI053 | qtl_marker |
Oryza sativa | QTL | AQGI173 | qtl_marker |
Oryza sativa | QTL | AQGI268 | qtl_marker |
Oryza sativa | QTL | AQHR058 | qtl_marker |
Oryza sativa | QTL | AQHR059 | qtl_marker |
Oryza sativa | QTL | AQS011 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT25866 | equivalent_to |
Oryza sativa | QTL | CQB33 | qtl_marker |
Oryza sativa | QTL | CQB34 | qtl_marker |
Oryza sativa Indica Group | Primer | RM228_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM228_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344048 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344048 | source_sequence |
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