ID | 11317 |
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Name | RM178 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM178 |
Repeat Motif | (GA)5(AG)8 |
Anneal Temperature | 67 |
Expected PCR Product Size | 117 |
Sequence Source | D49132 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 25,101,829-25,101,945 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 5 | 118.8-118.8 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 5 | 104.4-104.4 cM | View Comparative Map | ||||
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QTL | CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 3b | 62.8-62.8 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 5 | 118.8-118.8 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 5 | 146-146 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 5 | 106.3-106.3 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA032 | qtl_marker |
Oryza sativa | QTL | AQEE015 | qtl_marker |
Oryza sativa | QTL | AQEE019 | qtl_marker |
Oryza sativa | QTL | AQEE044 | qtl_marker |
Oryza sativa | QTL | AQEE046 | qtl_marker |
Oryza sativa | QTL | AQFE063 | qtl_marker |
Oryza sativa | QTL | AQFE076 | qtl_marker |
Oryza sativa | QTL | AQFE077 | qtl_marker |
Oryza sativa | QTL | AQFE096 | qtl_marker |
Oryza sativa | QTL | AQFE097 | qtl_marker |
Oryza sativa | QTL | AQFE115 | qtl_marker |
Oryza sativa | QTL | AQGP029 | qtl_marker |
Oryza sativa | QTL | CQAE10 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM178_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM178_reverse | primer_reverse |
Oryza sativa Japonica Group | EST | D49132 | contained_in_sequence |
Oryza sativa Japonica Group | EST | D49132 | source_sequence |
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