ID | 16739 | ||||
---|---|---|---|---|---|
Name | RG109 | ||||
Synonyms (3) |
|
||||
Type | RFLP | ||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RG109 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 2 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
---|---|
Gramene Diversity Rice Marker | 722 |
Gramene Diversity Rice Marker | 723 |
Gramene Diversity Rice Marker | 724 |
CAAATCGGCCAGAGATGTGTCAAACAGTGCGTGCGGCGAGACTTGCGTATTGTACGCTCGTCGTCGTCGTCAACATGTAG
AGGCAGTGCACAGCCCACCAAACTGTGCCGGTTATGCCTGCCTGTTTAACCTGTTTTGACTACGTCCGGGCCGGTCATGC
TGTTGGCCTGGCTTGACTTCGATCGTTTTTCTCGTTTTCACCGGCAGTGCAGCACAACTGAATTGACCATGGAAGTAGTA
TAAAAGTATAAAACAGTGAGTTTTTTTTTCTTTTTTCAAGGCAAAAACGTCATGAGCTCTCTGCCAAAGACTCAACGTGC
CAATCACTGTTAGGAGGAAATTATTACACCGTGAGAAGAACTAAACAACAGAGNAACTAGTGGAAACAAACACAAGANAG
GTCATAACATGCNAGGATACATTTTTACCGGANCGTNACATCCAACATCTNAGCTCTATGCCTCTAATCTCTATGGGAGN
ATGNAAGTATAACAGCTGGTGGACGGTGCGTGCCCGNCGCNNAATAATTGGCGNGTCGGANCGCNGNCGTAAGCNCTTGT
GNCAGCCGTGCGTNGGGGATNACCAAANGGGCNCTNTTTCCCCAAANCTTCC
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 38,530,957-38,531,467 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | KRGRP 1998 | BNL6.32 | 1 | 188.6-188.6 cM | View Comparative Map | |||
|
||||||||
TTU CTIR 2000 | BNL6.32 | 1 | 188.7-188.7 cM | View Comparative Map | ||||
|
||||||||
QTL | CNHZAU 3037/2428 BC1F1QTL 1997 | BNL6.32 | 1 | 74.7-74.7 cM | View Comparative Map | |||
|
||||||||
CNHZAU 3037/2428 F2 QTL 1997 | BNL6.32 | 1 | 109-109 cM | View Comparative Map | ||||
|
||||||||
CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 1 | 203.6-203.6 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 12 | 167-167 cM | View Comparative Map | |||||
|
||||||||
CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 1 | 174.3-174.3 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 12 | 88.7-88.7 cM | View Comparative Map | |||||
|
||||||||
CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 1 | 188.7-188.7 cM | View Comparative Map | ||||
|
||||||||
IRRI IR74/Jalmagna RI AFLP/RFLP QTL 2001 | BNL6.32 | 1 | 135-135 cM | View Comparative Map | ||||
|
||||||||
IRRI Mor/CO39 QTL 1994 | BNL6.32 | 1 | 43.3-43.3 cM | View Comparative Map | ||||
|
||||||||
KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 1 | 188.6-188.6 cM | View Comparative Map | ||||
|
||||||||
MU CT9993/IR6226 QTL 2004 | BNL6.32 | 1 | 235.9-235.9 cM | View Comparative Map | ||||
|
||||||||
TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 1 | 143.9-143.9 cM | View Comparative Map | ||||
|
||||||||
Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 219.2-219.2 cM | View Comparative Map | ||||
|
||||||||
Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 1 | 154.7-154.7 cM | View Comparative Map | ||||
|
||||||||
BNL6.32 | 12 | 167-167 cM | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 1 | 139.1-139.1 cM | View Comparative Map | |||
|
||||||||
Cornell RFLP 2001 | BNL6.32 | 1 | 97.3-97.3 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Huazhong RFLP 1997 | BNL6.32 | 1 | 158.3-158.3 cM | View Comparative Map | |||
|
RG109 SL Autorad: Survey blot of the probe RG109 for the BS125/2/BS125/WLO2 population |