ID | 11043 |
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Name | RG690 |
Synonyms (0) | None. |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG690 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 3.2 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 1368 |
TGTGGTCCCCACTTAGCGTCTTGCTTTCCCCGAGAGGCAAAGACGTTGGCCCCAAGCCCCCAACTGTAAGTCATCCTCAG
GCTGCTTTGCCTGCGTGACGACCACACCATATCTCTCCTCGCCTTGTTACAAAAACACAAGCTCTGCGTTCGCGTTGCCT
CGCACTTACACAACTGGACTGCATCAGTTTCTGATCACCGCGTTCGCTCGATCATTTGCTTCGTCCGAGAGATCATGGAG
GCGGAGGCGGATACGACGGTGACCGTGACAATGGAGGAGCAGCAGCGGGAGGCGACGGACAGCGAGGGGGAGGAAGCTGG
TGAGCCACAGGAAGGTGTTCGTGGGAGGGGTGCCGCTGGGGACAAGCGAGTCTGAGCTCCATGCCCACTTTTCGCAGTCC
GGCGCAGTGGCCTTCGTCGACACGCCCAAGAACAAGTAGAACGGGCGCCGCGCGTGGTTTCGCGTTCGTGCAGTTCGTGA
AANCCTGANGCCGCAATTGCCGCGGAGTCCGAACCGCAAAGTNCTCCGCTTGGAACCACGGTTNTACANCAACCCCAGAT
TTTGGNCCTGGNAATTGNNANNANATGGGCTCAAACTNCNCTTTCCTTTTTTTGCCGGGGNATTAATTTACCCCGATGNN
GGGGNNGNGGGGGTTTTNTCNGAANATTTTAANNNNCAAAAAAA
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 32,310,761-32,311,314 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 1 | 143.2-143.2 cM | View Comparative Map | |||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 1 | 182.2-182.2 cM | View Comparative Map | |||
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CNRRI Tes/CB QTL 1997 | BNL6.32 | 1 | 65.7-65.7 cM | View Comparative Map | ||||
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CNRRI Wai/CB QTL 1996 | BNL6.32 | 1 | 92.7-92.7 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 1 | 138.9-138.9 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 1 | 138.9-138.9 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 143.2-143.2 cM | View Comparative Map | ||||
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IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 1 | 120.5-120.5 cM | View Comparative Map | ||||
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IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 1 | 145.6-145.6 cM | View Comparative Map | ||||
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Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 177.5-177.5 cM | View Comparative Map | ||||
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Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 1 | 113.8-113.8 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 1 | 134.8-134.8 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 1 | 93.6-93.6 cM | View Comparative Map | ||||
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