![[Home Page]](/images/icons/gramene_logo180new.jpg "[Home Page]"){kind=icon}
Markers Home |
Markers Search |
Browse Map Sets |
SSR Markers Resource |
Microarray Probes |
Help |
Tutorial |
FAQs
Oryza sativa RFLP "RG222"
| ID | 11992 |
|---|---|
| Name | RG222 |
| Synonyms (0) | None. |
| Type | RFLP |
| Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
| Germplasm | |
| Description | |
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | RG222 |
| DNA Treatment | PstI-digested |
| Source Type | Genomic |
| Source Tissue | leaf |
| Source Treatment | |
| Vector | pUC8 |
| Vector Antibiotic Resistance | Ampicillin |
| Fragment Size | 1.3 |
| Vector Excision Enzyme | PstI |
| Vector Primers | M13 forward/M13 reverse |
| Overgo1 | |
| Overgo2 |
Database Cross-References (1)
Sequences (3)
Related Sequences (3)
Align All Sequences
Map Positions (15)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 40,741,959-40,742,506 bp | View Comparative Map | |||
|
||||||||
| BNL6.32 | Chr. 1 | 40,742,636-40,743,227 bp | View Comparative Map | |||||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | IGCN 1998 | BNL6.32 | 1 | 40.3-40.3 cM | View Comparative Map | |||
|
||||||||
| QTL | CNRRI Tes/CB QTL 1997 | BNL6.32 | 1 | 13.4-13.4 cM | View Comparative Map | |||
|
||||||||
| CNRRI Tes/CB QTL 1998 | BNL6.32 | 1 | 0-0 cM | View Comparative Map | ||||
|
||||||||
| CNRRI Wai/CB QTL 1996 | BNL6.32 | 1 | 11.2-11.2 cM | View Comparative Map | ||||
|
||||||||
| CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 1 | 267.8-267.8 cM | View Comparative Map | ||||
|
||||||||
| CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 1 | 238.7-238.7 cM | View Comparative Map | ||||
|
||||||||
| IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 1 | 40.3-40.3 cM | View Comparative Map | ||||
|
||||||||
| UCD Lab/Bla QTL 1998 | BNL6.32 | 1 | 222-222 cM | View Comparative Map | ||||
|
||||||||
| Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 1 | 195.5-195.5 cM | View Comparative Map | ||||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 1 | 60.2-60.2 cM | View Comparative Map | |||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell RFLP 1994 | BNL6.32 | 1 | 177.4-177.4 cM | View Comparative Map | |||
|
||||||||
| Cornell RFLP 2001 | BNL6.32 | 1 | 125.85-125.85 cM | View Comparative Map | ||||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Huazhong RFLP 1997 | BNL6.32 | 1 | 180.9-180.9 cM | View Comparative Map | |||
|
||||||||
Associations (20)
| Species | Type | Name | Assoc. Type |
|---|---|---|---|
| Oryza sativa | QTL | AQDJ011 | qtl_marker |
| Oryza sativa | QTL | AQDQ008 | qtl_marker |
| Oryza sativa | QTL | AQEP001 | qtl_marker |
| Oryza sativa | QTL | AQEP002 | qtl_marker |
| Oryza sativa | QTL | AQEP007 | qtl_marker |
| Oryza sativa | QTL | AQEP008 | qtl_marker |
| Oryza sativa | QTL | AQEZ001 | qtl_marker |
| Oryza sativa | QTL | AQEZ002 | qtl_marker |
| Oryza sativa | QTL | AQEZ005 | qtl_marker |
| Oryza sativa | QTL | AQEZ006 | qtl_marker |
| Oryza sativa | QTL | CQAO16 | qtl_marker |
| Oryza sativa | QTL | CQAX30 | qtl_marker |
| Oryza sativa | QTL | CQK1 | qtl_marker |
| Oryza sativa | QTL | CQK2 | qtl_marker |
| Oryza sativa | QTL | CQL1 | qtl_marker |
| Oryza sativa | QTL | CQL2 | qtl_marker |
| Oryza sativa | QTL | CQS3 | qtl_marker |
| Oryza sativa Indica Group | Genomic DNA | G73757 | related_sequence |
| Oryza sativa Indica Group | GSS | AQ074252 | related_sequence |
| Oryza sativa Indica Group | Genomic DNA | G73757 | contained_in_sequence |
Associated Ontologies (0)
Images (0)
