marcela.karey's blog

Gramene Webinar: Creating Gene Trees on Thurs, Dec 18, 2014 @ 1 - 1:30 PM EST

Gramene will be holding a series of webinars to support the community of Plant researchers, and breeder in utilizing various comparative genomics resources and tools available at Gramene database. These webinars will provide opportunities for direct interactions between database users and Gramene scientists and developers. Participants are welcome to suggest a specific topic for upcoming webinars. Each webinar will cover practical examples to address specific topics of general interest, such as:

Gramene database build 42 released

The Gramene Team is pleased to announce its release #42. In collaboration with Ensembl Plants we are providing in this release:

New & updated genomes

How I spent my summer -- Undergraduate Research Program @ CSHL

By Daniel Burkhart, URP 2014

Image: 

Daniel Burkhardt, URP 2014

INTERNET OUTAGE on Sunday, June 8 at 11:00 pm EDT

Please be advised that there will be a network upgrade affecting Gramene servers (internet and FTP) on Sunday, June 8th beginning at 11:00PM EDT and concluding at 1:00AM EDT Monday, June 9th.

Plan accordingly so that your work with the Gramene website and services is not affected by the temporary (~2h) internet outage.

Breeding bioinformatician open position with SGN

  • Title: Breeding Bioinformatician/Programmer

Gramene database build 41 released

The Gramene Team is pleased to announce its release #41. In collaboration with Ensembl Plants we are providing in this release:

Gramene at the Maize Genetics Conference 2014

For the first time in the context of the Maize Genetics Conference (Beijing, China on March 13-16, 2014), Gramene seized the opportunity to present a workshop for the maize community. The meeting brought about 600 maize researchers from around the World. Among those, about 100 meeting participants from Asia, Europe, and North America attended the Gramene workshop. The workshop provided an overview of Gramene’s comparative genomics and variation resources, including the Ensembl genome browser, BLAST and BioMart.

Gramene workshop at the Maize Genetics Conference 2014 — See you in Beijing!

Please join the Gramene Team for their upcoming workshop at the Maize Genetics Conference 2014!

Learn the latest updates to Gramene's comparative genomics and pathways visualization/mining tools to aid your research of plant models and crops.

This workshop will give a broad overview of Gramene's database resources and demonstrate many specific topics like how to:

How do you like the new Gramene site? -- Tell us what you think!

Last Friday, the Gramene website underwent a dramatic facelift. We hope that this has positively impacted your research, but we probably can do a lot more to improve.

Do you find the site easier or more difficult to navigate? Are you missing some functionality? How could we improve?

Please take a few minutes to take this short SURVEY and let us know what you think!

Gramene database build 40 released

The Gramene Team is pleased to announce its release #40.

You'll notice we have a new look --- You can find all the old stuff at Gramene's Archive

In collaboration with Ensembl Plants we are providing in this release:

  1. Updated gene models for Oryza sativa japonica from RAP-DB.
  2. Gene models for Triticum aestivum (bread wheat) chromosome survey sequences from MIPS.
  3. MaizeCyc updated to version 2.2 including new GO associations.

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